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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015912747.1_cds_XP_016462831.1_56014
CDS Infomation

[gene=LOC107785921] [db_xref=GeneID:107785921] [protein=DEAD-box ATP-dependent RNA helicase 1-like] [protein_id=XP_016462831.1] [location=complement(join(25644..25735,25949..26054,26702..26906,27628..27815,28816..28993,29423..29577,30553..30807,31224..31458,34096..34252,34436..34622))] [gbkey=CDS]
Sequence

ATGAAAATCCAAATTCCTTCAAACGGGCCGGATCCAACCCAAACCGTAAAACAGTTGACC
CAAATTGAACTATCAGCCCTCAACTTCCCGCCGTTAACTTTGCTCAGTTTCCATCTCTTT
CTGCAGCAAGCTCCTCACTTCCTCTCTTTCTCTGTATTCACTATCTCGCGTTCAAAACCC
TTTAAAGGATTTCAGCTGAAAAGGGGGAGCTTGATAATGGAGGAAGAAAAGGAGATGAAA
AAAGAGAAGAAAAACATCCCTGTAGTGCCATGGATGAGAAATCCAATTGATATTACTACC
TTTGATCAATGCTCTCTCGATTTTGTGCCTTTTCTTGATCCAGGGTTAGTGGTGGCTTTG
AAGAATATGGGCATCACTTCACTCTTTCCCGTGCAACTTGCTGTCTGGCAAGAGACAATT
GGACCTGGCTCATTTGAACGAGACCTTTGTATAAATTCACCTACTGGGAGCGGAAAAACT
CTTGCTTACGCGTTACCAATTGTTCAGATGCTGTCTACACGTGCTGTAAAATGTCTTCGT
GCACTAGTGGTCTTGCCTACTAGAGACCTCGCTTTGCAGGTCAAAGAGGTCTTCTCTGCT
CTTGCACCTGCAGTAGGTTTGTCTGTCGGCTTGGCAGTTGGTCAGTCATCAATTTCGGAT
GAAATTTCTGAGCTCATCAAGAAACCCAGTGTTGAGTATGGCAGATGTTATGATCCTGAA
GAATTCTCATACGAGTTACAAAGTGCAGTAGACATATTAGTGGCAACACCTGGAAGACTG
ATGGACCACATCAATAACACTGATGGTTTTACCCTTGAGCATCTATGTTATCTTGTTGTT
GATGAAACAGATAGGTTATTAAGGGAAGCTTATCAGTCCTGGCTGCCTACTGTCATCCAG
CTGACCAGCTTTTCAATTGATGGGAACTTCCCTTCTGCTGATGATCTTCTTCCTTGCAGT
TATGGTTCATTGAAGACAATCAGGAGAGTGGGCACAGAAAGAGGGTTCAAGGGCAAAGCC
TATCCAAGGCTTGCAAAGATGGTTTTATCAGCCACACTAACACAAGACCCAAGTAAACTT
GCTCAGCTTGATTTACATCACCCTCTTCTTTTGACGACTGGAGAAAGACGTTACAAGCTG
CCTGAAGAACTCAAATCATTTAAAGTGATATGTCAATCGAAGCTCAAGCCACTTTATCTA
GTTTCCCTTCTTCAAAGTCTGCAAGGGGAGAAATCAATTGTTTTCACATCATCTGTGGAG
TCCACTCATAGATTATGCACCTTGCTTAAGTTTTTCGACAATTTGCAAATTGAGTTCAAG
GAATATTCTCGTCTTCAACGTCAATCTGTAAGAAGCAAGACATTGAACGCCTTTCGGGCA
GGAAAAGTGCAGGTTCTTATTTCCTCTGATGCTATGACTCGTGGAATGGATGTTGAAGGA
GTTAGAAATGTCGTAAACTATGATATGCCTGCGTATATAAAAACATTTATTCATCGGGCG
GGTCGAACGGCAAGAGCAGGCCAAAGTGGATGTTGCTTTACTTTATTACGCAAAGACGAG
GTTAAGCGGTTCAAGAAGCTGTTACAAAAAGCTGACTGTGACTCTTGCCCCACATATTCT
GTTTCATCTGAAGTAATAGAGTCACTCAACTCTGTATATACCTCAGCTTTGGAGAAACTT
AGAGAGAATGTTGAATCAGAAAAGTTTAAGAAGAGCAAGATTAGATTGAAGTCTTCAAAT
GTGAGAAAGGAGAAGTGA

Peptide Sequence

PEP ID

XP_016462831.1
PEP Infomation

PREDICTED: DEAD-box ATP-dependent RNA helicase 1-like [Nicotiana tabacum]
Sequence

MKIQIPSNGPDPTQTVKQLTQIELSALNFPPLTLLSFHLFLQQAPHFLSFSVFTISRSKP
FKGFQLKRGSLIMEEEKEMKKEKKNIPVVPWMRNPIDITTFDQCSLDFVPFLDPGLVVAL
KNMGITSLFPVQLAVWQETIGPGSFERDLCINSPTGSGKTLAYALPIVQMLSTRAVKCLR
ALVVLPTRDLALQVKEVFSALAPAVGLSVGLAVGQSSISDEISELIKKPSVEYGRCYDPE
EFSYELQSAVDILVATPGRLMDHINNTDGFTLEHLCYLVVDETDRLLREAYQSWLPTVIQ
LTSFSIDGNFPSADDLLPCSYGSLKTIRRVGTERGFKGKAYPRLAKMVLSATLTQDPSKL
AQLDLHHPLLLTTGERRYKLPEELKSFKVICQSKLKPLYLVSLLQSLQGEKSIVFTSSVE
STHRLCTLLKFFDNLQIEFKEYSRLQRQSVRSKTLNAFRAGKVQVLISSDAMTRGMDVEG
VRNVVNYDMPAYIKTFIHRAGRTARAGQSGCCFTLLRKDEVKRFKKLLQKADCDSCPTYS
VSSEVIESLNSVYTSALEKLRENVESEKFKKSKIRLKSSNVRKEK

Transcript Sequence

Gene sequence data has not been registered.